1 # |
1 # |
2 # matching the following output specified as a pattern that verifies |
2 # matching the following output specified as a pattern that verifies |
3 # that the numerical values conform to a specific pattern, rather than |
3 # that the numerical values conform to a specific pattern, rather than |
4 # specific values. |
4 # specific values. |
5 # |
5 # |
6 # S0 S1 E O M CCS YGC YGCT FGC FGCT GCT |
6 # S0 S1 E O M CCS YGC YGCT FGC FGCT CGC CGCT GCT |
7 # 0.00 96.88 66.55 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
7 # 0.00 96.88 66.55 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
8 # 0.00 96.88 71.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
8 # 0.00 96.88 71.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
9 # 0.00 96.88 73.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
9 # 0.00 96.88 73.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
10 # 0.00 96.88 73.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
10 # 0.00 96.88 73.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
11 # 0.00 96.88 73.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
11 # 0.00 96.88 73.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
12 # 0.00 96.88 75.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
12 # 0.00 96.88 75.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
13 # 0.00 96.88 75.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
13 # 0.00 96.88 75.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
14 # 0.00 96.88 77.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
14 # 0.00 96.88 77.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
15 # 0.00 96.88 77.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
15 # 0.00 96.88 77.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
16 # 0.00 96.88 77.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
16 # 0.00 96.88 77.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
17 # S0 S1 E O M CCS YGC YGCT FGC FGCT GCT |
17 # S0 S1 E O M CCS YGC YGCT FGC FGCT CGC CGCT GCT |
18 # 0.00 96.88 79.58 2.34 77.78 68.02 1 0.003 0 0.000 0.003 |
18 # 0.00 96.88 79.58 2.34 77.78 68.02 1 0.003 0 0.000 0 0.000 0.003 |
19 |
19 |
20 BEGIN { |
20 BEGIN { |
21 headerlines=0; datalines=0; totallines=0 |
21 headerlines=0; datalines=0; totallines=0 |
22 datalines2=0; |
22 datalines2=0; |
23 } |
23 } |
24 |
24 |
25 /^ S0 S1 E O M CCS YGC YGCT FGC FGCT GCT $/ { |
25 /^ S0 S1 E O M CCS YGC YGCT FGC FGCT CGC CGCT GCT $/ { |
26 headerlines++; |
26 headerlines++; |
27 } |
27 } |
28 |
28 |
29 /^[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*([0-9]+\.[0-9]+)|-[ ]*[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+$/ { |
29 /^[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*([0-9]+\.[0-9]+)|-[ ]*[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+[ ]*[0-9]+\.[0-9]+[ ]*[0-9]+\.[0-9]+$/ { |
30 if (headerlines == 2) { |
30 if (headerlines == 2) { |
31 datalines2++; |
31 datalines2++; |
32 } |
32 } |
33 datalines++; |
33 datalines++; |
34 } |
34 } |