8141570: Fix Zero interpreter build for --disable-precompiled-headers Summary: change to include atomic.inline.hpp and allocation.inline.hpp only in .cpp files and some build fixes from Kim to build on ubuntu without devkits Reviewed-by: kbarrett, sgehwolf, erikj

^build/
^dist/
nbproject/private/
^webrev
^.hgtip
^.bridge2
.DS_Store
.metadata/
.recommenders/